Information for 11-CAAAAAAACTGAA (Motif 16)

T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
Reverse Opposite:
G A C T A C G T A G T C C G T A T C A G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.6 +/- 32.6bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAAACTGAA
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAAACTGAA
GTTCAAAAAAAAAATTC-
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAAACTGAA
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAAAAAACTGAA---
-GAAAAAATTGCAAGG
 T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAAACTGAA
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAAACTGAA
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAAAACTGAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAAAAAACTGAA
--NANANAC----
 T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CAAAAAAACTGAA
CAATTGCAAAAATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAAACTGAA
CCAATAAAAC----
 A C G T T G A C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A G T C C G A T A C T G C G T A C T G A
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T