Information for 9-GCGGGCATCG (Motif 20)

C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
Reverse Opposite:
A G T C C T A G G T C A C G A T A T C G A T G C G T A C G T A C A C T G G A T C
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.820
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif283.0
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets42.1 +/- 24.1bp
Average Position of motif in Background50.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCATCG
NGTGGGCAT--
 A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCATCG
TNNGGGCAG--
 A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCATCG
GGTTGGCAT--
 A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCGGGCATCG
CWGGCGGGAA---
 A C G T A C G T A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGGCATCG-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGCATCG--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGGGCATCG
TATGCGGGTA---
 A C G T A C G T A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCGGGCATCG
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGGGCATCG
GGCGGGAAAH-
 A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGCATCG
TGGCGGGAAAHB
 A C G T A C G T C T A G T G A C C A T G A C T G A T C G A T G C C G T A C A G T A G T C T C A G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G