Information for 12-CTGAGAAATGGCG (Motif 18)

A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.778e+01
Information Content per bp:1.928
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.3 +/- 14.9bp
Average Position of motif in Background48.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTGAGAAATGGCG---
-----TAATGGCGGNC
 A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGAGAAATGGCG
-TGATTRATGGCY
 A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGAAATGGCG
CSTGGGAAAD----
 A C G T A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGAAATGGCG
TTTCTNAGAAAN----
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGAGAAATGGCG-----
---AGAAATGACTTCCCT
 A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGAGAAATGGCG
-TGATTGATGA--
 A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGAGAAATGGCG--------
---AAAAATGGCGCCATTTTT
 A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGAAATGGCG
TTCTTGGAAAN----
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTGAGAAATGGCG
CATTTCCTGAGAAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGAAATGGCG
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G T C G A C G T A G T C A A C G T A C T G C T A G A T G C A C T G
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T