| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.632e+01 | 0.0000 | 199.0 | 21.22% | 6891.1 | 14.79% | motif file (matrix) |
svg |
| 2 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-6 | -1.393e+01 | 0.0002 | 302.0 | 32.20% | 11743.2 | 25.20% | motif file (matrix) |
svg |
| 3 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-3 | -8.113e+00 | 0.0363 | 34.0 | 3.62% | 876.2 | 1.88% | motif file (matrix) |
svg |
| 4 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-3 | -7.359e+00 | 0.0580 | 41.0 | 4.37% | 1175.1 | 2.52% | motif file (matrix) |
svg |
| 5 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-2 | -6.248e+00 | 0.1408 | 65.0 | 6.93% | 2217.3 | 4.76% | motif file (matrix) |
svg |
| 6 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-2 | -6.217e+00 | 0.1408 | 31.0 | 3.30% | 869.7 | 1.87% | motif file (matrix) |
svg |
| 7 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.138e+00 | 0.1408 | 43.0 | 4.58% | 1335.3 | 2.87% | motif file (matrix) |
svg |
| 8 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.841e+00 | 0.1408 | 11.0 | 1.17% | 200.2 | 0.43% | motif file (matrix) |
svg |
| 9 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.679e+00 | 0.1408 | 72.0 | 7.68% | 2569.2 | 5.51% | motif file (matrix) |
svg |
| 10 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -5.496e+00 | 0.1493 | 40.0 | 4.26% | 1265.1 | 2.71% | motif file (matrix) |
svg |
| 11 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-2 | -5.124e+00 | 0.1970 | 24.0 | 2.56% | 672.9 | 1.44% | motif file (matrix) |
svg |
| 12 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.806e+00 | 0.2481 | 74.0 | 7.89% | 2757.4 | 5.92% | motif file (matrix) |
svg |
