Information for 18-TTAGGATCCAGTT (Motif 30)

A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T
Reverse Opposite:
G T C A C G T A A G T C A C G T A C T G A T C G C G T A A C G T A G T C A G T C A C G T C T G A C G T A
p-value:1e-5
log p-value:-1.353e+01
Information Content per bp:1.938
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 15.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTAGGATCCAGTT-
--AGGAAACAGCTG
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTAGGATCCAGTT
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

TFCP2/MA0145.3/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTAGGATCCAGTT-
----AAACCGGTTT
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTAGGATCCAGTT
---ACATCCTGNT
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTAGGATCCAGTT--
---GKMTCADRTTWC
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTAGGATCCAGTT-----
-NNNANTGCAGTGCNNTT
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------TTAGGATCCAGTT
GNNNTTTTACGACCTNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTAGGATCCAGTT--
---GKVTCADRTTWC
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGATCCAGTT
BTVATTWGCATA-----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TTAGGATCCAGTT------
---TAAGCCACTTAACATT
 A C G T A G C T C G T A A C T G C T A G C G T A A C G T A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T