Information for 14-CAYCRGMGYGKCT (Motif 24)

A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A A G T C T C G A A G T C C A T G A G T C G A T C A C T G C T A G A C G T A C T G
p-value:1e-6
log p-value:-1.583e+01
Information Content per bp:1.852
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.3 +/- 23.9bp
Average Position of motif in Background42.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAYCRGMGYGKCT------
----GGNGCGNCTGTTNNN
 A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAYCRGMGYGKCT--
CAAAGGCGTGGCCAG
 A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAYCRGMGYGKCT
CACAGCGGGGGGTC-
 A C G T A C G T A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAYCRGMGYGKCT
NCGCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAYCRGMGYGKCT--
-----VBSYGTCTGG
 A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAYCRGMGYGKCT
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAYCRGMGYGKCT
NNCACCTGNN-----
 A C G T A C G T A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAYCRGMGYGKCT
AACACCTGCT-----
 A C G T A C G T A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAYCRGMGYGKCT
--CTTGAGTGGCT
 A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CAYCRGMGYGKCT--
-------TWGTCTGV
 A G T C C G T A A G T C A G T C C T A G A C T G G T A C A C T G A G C T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G