Information for 5-CACGCAGTGG (Motif 11)

A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G
Reverse Opposite:
G A T C A G T C T C G A G T A C A G C T A C T G A T G C T A C G A G C T A C T G
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.831
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif282.9
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets53.7 +/- 32.4bp
Average Position of motif in Background49.4 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CACGCAGTGG
CACGCA----
 A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CACGCAGTGG
TBGCACGCAA---
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACGCAGTGG----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACGCAGTGG--
GCCGCGCAGTGCGT
 A C G T A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACGCAGTGG
CCTGCTGAGH
 A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACGCAGTGG--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACGCAGTGG-
ACAGGATGTGGT
 A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G A C G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACGCAGTGG
GCACGTNC---
 A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CACGCAGTGG
ACAGGAAGTG-
 A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACGCAGTGG--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C T C G A A C T G A G C T A C T G C A T G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G