Information for 1-AGCACGCCGGCCAGCG (Motif 1)

G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
Reverse Opposite:
G T A C A C T G A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C T G A G T C A T C G A C G T A T C G A T G C C A G T
p-value:1e-15
log p-value:-3.591e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.9 +/- 22.4bp
Average Position of motif in Background26.7 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCACGCCGGCCAGCG--
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCACGCCGGCCAGCG--
TCAGCACCATGGACAGCTCC
 A C G T A C G T G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCACGCCGGCCAGCG
AGCGCGCC--------
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCACGCCGGCCAGCG
--CACGCA--------
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AGCACGCCGGCCAGCG
--------TGCCAA--
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCACGCCGGCCAGCG
TGGCAGNCTGCCAG--
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGCACGCCGGCCAGCG
------CGTGCCAAG-
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGCACGCCGGCCAGCG
TNAACGACGTCGNCCA---
 A C G T A C G T A C G T G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGCACGCCGGCCAGCG
TGCCCNNAGGGCA---
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGCACGCCGGCCAGCG
TGCCCTGAGGGCA---
 G C T A A T C G A T G C G T C A A T G C A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G T A G C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T