Information for 5-CTATTTTTAGCCC (Motif 6)

A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G A C T G G A T C C G A T G T C A C G T A C G T A C G T A G C T A A G C T C G T A A C T G
p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.787
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.9 +/- 25.5bp
Average Position of motif in Background49.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAGCCC
GCTATTTTTAGC--
 A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CTATTTTTAGCCC
TTCTATTTTTAGNNN
 A C G T A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGCCC
TCTATTTTTAGA--
 A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGCCC
GCTATTTATAGC--
 A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGCCC
KCTATTTTTRGH--
 A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAGCCC
TCTATTTATAGN--
 A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAGCCC
GCTATTTTTGGM--
 A C G T A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CTATTTTTAGCCC
CTATTTTTGG---
 A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTATTTTTAGCCC
CCATATATGG---
 A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTATTTTTAGCCC
-----ATAATCCC
 A G T C A C G T C T G A C A G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C