Information for 2-GAGCCAAAGG (Motif 7)

A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G
Reverse Opposite:
T G A C A G T C C G A T A C G T A G C T A C T G A T C G A G T C A G C T A T G C
p-value:1e-10
log p-value:-2.395e+01
Information Content per bp:1.842
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif193.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets45.0 +/- 28.4bp
Average Position of motif in Background49.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCAAAGG---
TGGGGCAAAGGTCA
 A C G T A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGCCAAAGG
AAAACAAAGG
 A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAGCCAAAGG---
GTAGGGCAAAGGTCA
 A C G T A C G T A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAAAGG---
TAGGGCAAAGGTCA
 A C G T A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAGCCAAAGG
--RACAAWGG
 A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGCCAAAGG---
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAGCCAAAGG
--AACAAAGG
 A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAAAGG
CGTGCCAAG--
 A C G T A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGCCAAAGG
GGAACAAAGR
 A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGCCAAAGG---
AGAGTCCAAAGTCCA
 A C G T A C G T A T C G T C G A C T A G A T G C G T A C C T G A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A