Information for 1-CSTCCMCSCAGCGRSA (Motif 1)

A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A
Reverse Opposite:
A G C T A T G C A G T C A G T C A C T G A G T C A C G T A T C G A T G C T C A G A C G T A T C G T A C G C T G A T A G C A C T G
p-value:1e-11
log p-value:-2.730e+01
Information Content per bp:1.730
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 29.5bp
Average Position of motif in Background42.0 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CSTCCMCSCAGCGRSA-
---TCAGNGAGCGTGAC
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A A C G T
A C G T A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CSTCCMCSCAGCGRSA
--------CAGCC---
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CSTCCMCSCAGCGRSA---
---------GGCGGGAARN
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CSTCCMCSCAGCGRSA-----
------TTGACCGAGAATTCC
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CSTCCMCSCAGCGRSA---
---------GGCGGGAAAH
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CSTCCMCSCAGCGRSA---
--------GGGCGGGAAGG
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CSTCCMCSCAGCGRSA
CTACGCCCACGCACT----
 A C G T A C G T A C G T A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CSTCCMCSCAGCGRSA
CRCCCACGCA------
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CSTCCMCSCAGCGRSA
ACGCCCACGCA------
 A C G T A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CSTCCMCSCAGCGRSA
------CGGAGC----
 A G T C A T C G A G C T A T G C A T G C G T C A A G T C A T C G T A G C G T C A C T A G A G T C A C T G C T A G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T