Information for 14-TCAGGGCCATGAC (Motif 19)

A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
Reverse Opposite:
T C A G G A C T A T G C G T C A C A G T C T A G A C T G A T G C G T A C G T A C G A C T A T C G G T C A
p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.635
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif262.6
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets50.7 +/- 27.2bp
Average Position of motif in Background48.3 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAGGGCCATGAC
NTCAAGGTCA----
 A C G T A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCAGGGCCATGAC
-CAAGGHCANV--
 A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAGGGCCATGAC
TTCAAGGTCAT---
 A C G T A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAGGGCCATGAC
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAGGGCCATGAC
BTCAAGGTCA----
 A C G T A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGGGCCATGAC
AGGTCAAGGTCA----
 A C G T A C G T A C G T A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAGGGCCATGAC--
-NAGGTCANTGACCT
 A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCAGGGCCATGAC-
------NCGTGACN
 A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGGGCCATGAC
TCAAGGTCATA--
 A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TCAGGGCCATGAC
-------CATGAC
 A C G T A T G C C T G A A C T G C A T G A T C G G T A C A G T C G T C A A C G T A T C G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C