p-value: | 1e-7 |
log p-value: | -1.661e+01 |
Information Content per bp: | 1.748 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.50% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 50.6 +/- 24.1bp |
Average Position of motif in Background | 45.3 +/- 18.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0158.1_Rfx3_2/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTKGGTAACCAGGAGG---- NNTNGNNGTAACCAAGNNNNAGN |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTKGGTAACCAGGAGG -NNNGTAACTANGNNA |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CTKGGTAACCAGGAGG--- -------CACAGCAGGGGG |
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SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CTKGGTAACCAGGAGG- -------ANCAGGATGT |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTKGGTAACCAGGAGG----- ------DCHCAGCAGGRGGCC |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTKGGTAACCAGGAGG--- ----CCACACAGCAGGAGA |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTKGGTAACCAGGAGG--- ----CCACACAGCAGGAGA |
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RARA::RXRA/MA0159.1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTKGGTAACCAGGAGG--- --AGGTCACGGAGAGGTCA |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTKGGTAACCAGGAGG WDNCTGGGCA--------- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTKGGTAACCAGGAGG ------DCTCAGCAGG |
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