Information for 12-GCGCAGGCCTGCG (Motif 16)

A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G A T G C
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.867
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 22.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCGCAGGCCTGCG
--CNAGGCCT---
 A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCGCAGGCCTGCG
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGGCCTGCG
TGCGCAGGCGC---
 A C G T A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCGCAGGCCTGCG
--CTAGGCCT---
 A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGCAGGCCTGCG
ATGCCCGGGCATGT-
 A C G T A C G T A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGCAGGCCTGCG
-AGCGCGCC----
 A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCAGGCCTGCG-
GGGGCTYGKCTGGGA
 A C G T A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCGCAGGCCTGCG
NNGGCCACGCCTTTN
 A C G T A C G T A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCGCAGGCCTGCG
-------GCTGTG
 A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCGCAGGCCTGCG
---CACGCA----
 A T C G G T A C C T A G A G T C C G T A A T C G A C T G A G T C A T G C A C G T A C T G A G T C A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T