Information for 7-AGGGBGGRAC (Motif 6)

C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
Reverse Opposite:
C A T G A G C T A G T C A G T C A T G C T C G A A G T C A G T C A G T C A C G T
p-value:1e-12
log p-value:-2.784e+01
Information Content per bp:1.731
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.43%
Number of Background Sequences with motif445.0
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets43.3 +/- 26.8bp
Average Position of motif in Background47.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGGGBGGRAC-
-GGGCGGGACC
 C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C A C G T
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGGGBGGRAC
GGGGNGGGGC
 C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGGGBGGRAC--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGGGBGGRAC
GGGGGCGGGGC
 A C G T C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGBGGRAC
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C G T A C G T C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGGBGGRAC
DGGGYGKGGC
 C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGGGBGGRAC
TGGGTGGGGC
 C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGGGBGGRAC--
AGGGGGCGGGGCTG
 A C G T A C G T C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGGGBGGRAC---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGGBGGRAC
RGKGGGCGGAGC
 A C G T A C G T C G T A T C A G C T A G A C T G A G C T T A C G A C T G C T A G C T G A G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C