Information for 7-GCTDGGTGCAAGG (Motif 5)

A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G C T A C T G A G T C C G T A A G T C A G T C G A C T G T C A A C T G A G T C
p-value:1e-12
log p-value:-2.786e+01
Information Content per bp:1.844
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.4 +/- 25.6bp
Average Position of motif in Background52.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
-AGGGGTCAGAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
-GTAGGGCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
--GAGGTCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
--GAGGTCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTDGGTGCAAGG---
--TGGGGCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
--GGGGTCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
--GGGGTCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
--GGGGTCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTDGGTGCAAGG---
--TAGGGCAAAGGTCA
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTDGGTGCAAGG----
-NNAGGGACAAGGGCNC
 A C T G A G T C A C G T C G T A A C T G A C T G A C G T C T A G G T A C T C G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C