Information for 10-TTTTGTSCWTTKG (Motif 13)

A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A C G T A C G T A C G A T A C T G A T C G C G T A A G T C C T G A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 24.8bp
Average Position of motif in Background65.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTSCWTTKG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGTSCWTTKG
WCATTTTGKCCTCYT-
 A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTSCWTTKG
CCTTTGTTTT----
 A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTGTSCWTTKG
TGACCTTTTGACCTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTGTSCWTTKG
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTTTGTSCWTTKG-----
--TTGACCTTTTGACCTT
 A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTTGTSCWTTKG-
---TGTGGATTNNN
 A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTTGTSCWTTKG
-NNTGTGGATTSS
 A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTSCWTTKG
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTSCWTTKG
YCTTTGTTCC----
 A C G T A C G T A C G T C G A T A G C T A C T G A C G T A T G C A G T C G C A T A C G T A C G T A C G T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T