Information for 2-GGGGCCGGCGCCCAGA (Motif 3)

A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A T C G A C T G A C T G A G T C C T A G A G T C A G T C A T C G A C T G A G T C A G T C A T G C A G T C
p-value:1e-13
log p-value:-3.027e+01
Information Content per bp:1.859
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 29.1bp
Average Position of motif in Background56.5 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGGCCGGCGCCCAGA
GGGGGCGGGGCC----
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGGCCGGCGCCCAGA-
-TTGGGGGCGCCCCTAG
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGGCCGGCGCCCAGA--
-AGCTCGGCGCCAAAAGC
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGGCCGGCGCCCAGA
----AGCGCGCC----
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GGGGCCGGCGCCCAGA--
--------TGCCCAGNHW
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGGCCGGCGCCCAGA
RGKGGGCGGAGC-----
 A C G T A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGGCCGGCGCCCAGA--
-CCTTCGGCGCCAAAAGG
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGGGCCGGCGCCCAGA
-GCGCCTGCGCA----
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GGGGCCGGCGCCCAGA
-------CTGCCCGCA
 A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCCGGCGCCCAGA
TTGGCANNNTGCCAAG-
 A C G T A C T G A T C G A C T G T A C G G T A C A T G C C T A G A C T G A G T C A C T G A G T C A G T C A T G C C T G A A C T G C G T A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T