Information for 14-CCCRACAGGS (Motif 19)

G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C
Reverse Opposite:
A T C G A T G C T A G C G A C T C A T G C G A T G A T C T A C G C A T G C T A G
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.675
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif1512.1
Percentage of Background Sequences with motif3.26%
Average Position of motif in Targets52.0 +/- 26.7bp
Average Position of motif in Background49.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCRACAGGS-
TGCCCTGAGGGCA
 A C G T A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCCRACAGGS-
TGCCCCCGGGCA
 A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCRACAGGS-
TGCCCNNAGGGCA
 A C G T A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCCRACAGGS-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCRACAGGS-
TGCCCTNAGGGCA
 A C G T A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCRACAGGS--
CACAGCAGGGGG
 G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCRACAGGS-
TGCCCCAGGGCA
 A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCRACAGGS----
DCHCAGCAGGRGGCC
 A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCRACAGGS-
TGCCCCAGGGCA
 A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCRACAGGS--
NTGCCCTAGGGCAA
 A C G T A C G T G A T C G A T C A T G C C T A G G C T A G T A C C T G A A T C G T A C G A T G C A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A