Information for 13-GCCTAGCGGC (Motif 17)

A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C
Reverse Opposite:
C T A G G A T C A T G C T C A G A T G C A G C T T C G A A C T G A C T G T A G C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.824
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif454.3
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets52.6 +/- 24.3bp
Average Position of motif in Background50.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGCGGC-
TGCCCNGGGGCA
 A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGCGGC--
CCGCCCAAGGGCAG
 A C G T A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGCGGC-
TGCCCTNGGGCA
 A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGCGGC-
TGCCCTNGGGCA
 A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGCGGC
AGGCCTAG----
 A C G T A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAGCGGC--
NTGCCCANNGGTNA
 A C G T A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCTAGCGGC-
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAGCGGC--
NTGCCCTAGGGCAA
 A C G T A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTAGCGGC--
SCCTAGCAACAG
 A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGCGGC
AGGCCTNG----
 A C G T A C G T A T C G G T A C A G T C A G C T T C G A A T C G A G T C A T C G C A T G A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T