Information for 5-ATGGAWATTAGTMTTW (Motif 6)

C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A A C T G C T G A G T A C C G A T G T C A C G T A A C G T C G T A A G C T A G T C A G T C C G T A C G A T
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.769
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.5 +/- 27.2bp
Average Position of motif in Background36.9 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATGGAWATTAGTMTTW
AAGGATATNTN-----
 C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATGGAWATTAGTMTTW
AATATGCAAATTAG-----
 A C G T A C G T A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAWATTAGTMTTW
NATGGAAAAN-------
 A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGAWATTAGTMTTW
WATGCAAATGAG-----
 A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAWATTAGTMTTW
AATGGAAAAT-------
 A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAWATTAGTMTTW
AATGGAAAAT-------
 A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGAWATTAGTMTTW
NNTGGAAANN-------
 A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGGAWATTAGTMTTW
TTATGCAAATTA------
 A C G T A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGGAWATTAGTMTTW
ATATGCAAATNNN-----
 A C G T A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGGAWATTAGTMTTW
TATGCWAATBAV-----
 A C G T C G T A C G A T C T A G A C T G C T G A C G A T C G T A A C G T A C G T C G T A C A T G G A C T G T A C C G A T A C G T C G A T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T