Information for 4-CACAGGCCACCTGCCT (Motif 5)

A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
Reverse Opposite:
C T G A A C T G C T A G A T G C G T C A A C T G T A C G C G A T A T C G A T C G A T G C A G T C A C G T A C T G A C G T T C A G
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.761
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 26.7bp
Average Position of motif in Background54.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CACAGGCCACCTGCCT
----SNGCACCTGCHS
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CACAGGCCACCTGCCT
------NCACCTGTN-
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CACAGGCCACCTGCCT
-----NNCACCTGNN-
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CACAGGCCACCTGCCT--
-----TGCAGCTGTCCCT
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CACAGGCCACCTGCCT
-----TACACCTGTC-
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CACAGGCCACCTGCCT
----NNGCAGCTGTC-
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACAGGCCACCTGCCT
CAAAGGTCAG------
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CACAGGCCACCTGCCT-
-----GCCAGCTGBTNB
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACAGGCCACCTGCCT
----NNVCAGCTGB--
 A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCCACCTGCCT
TCTCAAAGGTCACCTG---
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A C T A G A T C G A T G C A T G C C G T A A T G C G T A C A C G T A T C G A G T C A G T C G A C T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T A C G T