Information for 21-CHACGSTGCCCTC (Motif 33)

A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G C T A G A C T G A T G C C G T A A T C G A G T C T A C G C G A T C G T A A C T G
p-value:1e-6
log p-value:-1.591e+01
Information Content per bp:1.706
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif114.9
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets42.5 +/- 25.7bp
Average Position of motif in Background49.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:CHACGSTGCCCTC-
------TGACCTYA
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CHACGSTGCCCTC-
------TGACCYCT
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CHACGSTGCCCTC-
-----CTGCCCGCA
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CHACGSTGCCCTC--
-----CTGACCTTTG
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CHACGSTGCCCTC
-----GTGACCTT
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CHACGSTGCCCTC-
-----ATGCCCACC
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CHACGSTGCCCTC
------TGACCT-
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CHACGSTGCCCTC--
-----NTGACCTTGA
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CHACGSTGCCCTC---
------TGACCTTGAT
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CHACGSTGCCCTC-------
CNNBRGCGCCCCCTGSTGGC
 A G T C G C A T G C T A A T G C C T A G A T G C C G A T A T C G G T A C A G T C A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C