Information for 5-GAATCAATAT (Motif 30)

A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
Reverse Opposite:
C T G A A C G T C G T A C A G T A C G T A C T G C G T A A C G T C G A T T A G C
p-value:1e-7
log p-value:-1.815e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif65.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets41.3 +/- 21.2bp
Average Position of motif in Background50.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GAATCAATAT
HNRAATCAAT--
 A C G T A C G T A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GAATCAATAT
DGATCRATAN
 A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GAATCAATAT-
AAAAAATCAATAAT
 A C G T A C G T A C G T A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GAATCAATAT-
AAAAAATCGATAAT
 A C G T A C G T A C G T A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GAATCAATAT-
AAAAAATCGATAAT
 A C G T A C G T A C G T A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GAATCAATAT
TAATCGATAA
 A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAATCAATAT
TAATCGATAA
 A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAATCAATAT
CCAATCAA---
 A C G T A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GAATCAATAT--
--ATGAATATTC
 A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T A C G T A C G T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAATCAATAT
TAATCAATTA
 A T C G C G T A C G T A A C G T G T A C C G T A G T C A C G A T C G T A G A C T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A