Information for 13-TGAACCCTAGTTTTGT (Motif 27)

A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C G T A C G T A G A T C A C G T C G T A A C T G C A T G C T A G A C G T C G A T A G T C C G T A
p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 9.7bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGAACCCTAGTTTTGT-
--AACACTACCATTGTT
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGAACCCTAGTTTTGT-
-----KCTATTTTTRGH
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGAACCCTAGTTTTGT-
-----GCTATTTTTGGM
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGAACCCTAGTTTTGT---
----TTCTATTTTTAGNNN
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Sox1/MA0870.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGAACCCTAGTTTTGT-
--AACAATAACATTGTT
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGAACCCTAGTTTTGT
TGTCGTGACCCCTTAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGAACCCTAGTTTTGT
NNNNTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGAACCCTAGTTTTGT
------CTATTTTTGG
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGAACCCTAGTTTTGT-
-----GCTATTTTTAGC
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:forward strand
Alignment:TGAACCCTAGTTTTGT---
---------CCTTTGTTTT
 A C G T A C T G C G T A C G T A A G T C G A T C G T A C A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T