Information for 9-TTCSTATTGTCTMWAY (Motif 16)

A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
Reverse Opposite:
C T A G A G C T G C A T C A G T C T G A C T A G C G T A G T A C C G T A C G T A A C G T C G T A T A C G A T C G C T G A C T G A
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.3 +/- 17.0bp
Average Position of motif in Background67.0 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTCSTATTGTCTMWAY
TNNTTTCGTATTNNANN---
 A C G T A C G T A C G T A C G T A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTCSTATTGTCTMWAY
--CTCATTGTC-----
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCSTATTGTCTMWAY-
CNNNTATTGTTCNNNNN
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCSTATTGTCTMWAY
--NCCATTGTTY----
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCSTATTGTCTMWAY
NNTTTATTGTTCTNNN
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCSTATTGTCTMWAY
NNNCCATTGTGTNAN-
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTCSTATTGTCTMWAY--
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTCSTATTGTCTMWAY-
-TTCAATTGTTCTAAAA
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTCSTATTGTCTMWAY
TGTTCCCATTGTGTACT-
 A C G T A C G T A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTCSTATTGTCTMWAY
-----ATTGTTTAN--
 A G C T A G C T A T G C A T G C A C G T C G T A C G A T A C G T C A T G A C G T G A T C A G C T G T C A C G T A C T G A G A T C
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T