Information for 6-ATGVTTTTGCTCC (Motif 11)

C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A C T G G T A C C G T A T G C A G T C A C G T A A G T C A G T C C G T A A C G T
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 20.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:8
Orientation:forward strand
Alignment:ATGVTTTTGCTCC-
--------GCTCCG
 C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATGVTTTTGCTCC-
----CNGTCCTCCC
 C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATGVTTTTGCTCC
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Sox1/MA0870.1/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ATGVTTTTGCTCC
AACAATGNTATTGTT--
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATGVTTTTGCTCC
GYCTGGYYTNTGTCA
 A C G T A C G T C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ATGVTTTTGCTCC
ATGMATATDC---
 C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:ATGVTTTTGCTCC
----TTTTCCA--
 C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATGVTTTTGCTCC
NTAATKGTTT------
 A C G T A C G T A C G T C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:ATGVTTTTGCTCC-
----TKCTGTTCCA
 C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----ATGVTTTTGCTCC
AAAACATCGTTTTTAAG-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G T A C G A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T G C A G T C
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G A C G T