Information for 16-CAGGTACCAAGTC (Motif 26)

A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
Reverse Opposite:
T A C G C G T A A G T C A C G T A C G T A C T G A C T G C A G T G T C A T G A C A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.604e+01
Information Content per bp:1.713
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif50.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets36.1 +/- 25.8bp
Average Position of motif in Background53.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGGTACCAAGTC
--GGTGCCAAGT-
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGGTACCAAGTC
----TGCCAA---
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGGTACCAAGTC
--CGTGCCAAG--
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAGGTACCAAGTC
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGTACCAAGTC
TTATGTACTAATAA
 A C G T A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGTACCAAGTC
--GTAAACAAT--
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGGTACCAAGTC
---TTGCCAAG--
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAGGTACCAAGTC
-----AACAAT--
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGGTACCAAGTC----
-GGGGTCAAAGTCCAAT
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGGTACCAAGTC--
AGAGTCCAAAGTCCA
 A G T C G T C A C T A G A C T G C A G T G C T A G T A C A G T C C G T A C G T A A C T G A C G T A G T C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A