Information for 15-CAGTAGCATATCT (Motif 25)

A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T
Reverse Opposite:
T C G A T C A G C G T A A C G T C T G A A C G T C A T G T G A C A G C T C T G A A G T C C A G T A T C G
p-value:1e-7
log p-value:-1.688e+01
Information Content per bp:1.692
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 19.3bp
Average Position of motif in Background47.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAGTAGCATATCT
ADGGYAGYAGCATCT--
 A C G T A C G T A C G T A C G T A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGTAGCATATCT
ACCCGTATCAAATTT
 A C G T A C G T A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGCATATCT
ATTTACAGTAGCAAAA--
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGCATATCT
ATGTACAGTAGCAAAG--
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGTAGCATATCT--
---NAACATATGTTT
 A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

OLIG1/MA0826.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGTAGCATATCT-
----AACATATGTT
 A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGTAGCATATCT-
----ACCATATGTT
 A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAGTAGCATATCT
-----CCATATGT
 A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGTAGCATATCT-
----ANCATATGTT
 A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGTAGCATATCT-
----ACCATATGTT
 A T G C G C T A C T A G A G C T C T G A A C T G G A T C C G T A A G C T T G C A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T