Information for 16-AGGGTGCTCAATATTA (Motif 23)

C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A G C T C G T A A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C T A G C A G T C A C G T
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 15.0bp
Average Position of motif in Background66.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGGGTGCTCAATATTA-
---NNTNNCAATATTAG
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGGGTGCTCAATATTA-
---NNTNNCAATATTAG
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGCTCAATATTA
CGAACAGTGCTCACTAT--
 A C G T A C G T A C G T C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGGTGCTCAATATTA--
-GCAACCTCATTATNNNN
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A A C G T A C G T
A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGGGTGCTCAATATTA
----AGCTCATTAT--
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGGGTGCTCAATATTA--
-NNNACCTCATTATCNTN
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A A C G T A C G T
A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGGGTGCTCAATATTA
--GTTGCGCAAT----
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGGGTGCTCAATATTA
----DGATCRATAN--
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGCTCAATATTA
GGGTGTGCCCAAAAGG-
 A C G T C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

CUX1/MA0754.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGGTGCTCAATATTA
----TAATCGATAA--
 C G T A A C T G A T C G C T A G C G A T C T A G A G T C A C G T A G T C C G T A G T C A A C G T C T G A A C G T A C G T C T G A
A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T