Information for 10-GCAKTGWGAGCCA (Motif 17)

A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A
Reverse Opposite:
C G A T A C T G A T C G T A G C G A C T A G T C C G T A A G T C C G T A T G A C C G A T A C T G G T A C
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.692
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif167.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets40.6 +/- 19.2bp
Average Position of motif in Background52.3 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCAKTGWGAGCCA--
------CGTGCCAAG
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GCAKTGWGAGCCA-
--------TGCCAA
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCAKTGWGAGCCA
---GTGGGCCCCA
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCAKTGWGAGCCA-
--RGTTAGTGCCCY
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T
A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCAKTGWGAGCCA--
---BTGABTGACAGS
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCAKTGWGAGCCA-
-AGGTGNCAGACAG
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCAKTGWGAGCCA--
---NTGATTGACAGN
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCAKTGWGAGCCA
------TGAGTCA
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCAKTGWGAGCCA
-AGGTGHCAGACA
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCAKTGWGAGCCA---
------GGTGCCAAGT
 A C T G T G A C C G T A A C T G A C G T T C A G C G A T T C A G C T G A A T C G T A G C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T