Information for 7-CCTGGCAGCAGTG (Motif 12)

A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A T C G A G T C A G C T A C T G A G T C A G T C C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 26.1bp
Average Position of motif in Background62.1 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTGGCAGCAGTG
SCCTAGCAACAG--
 A C G T A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGGCAGCAGTG
SCTGTCARCACC-
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTGGCAGCAGTG
CTTGGCAA-----
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTGGCAGCAGTG-----
-NNNANTGCAGTGCNNTT
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTGGCAGCAGTG
-TTGGCA------
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTGGCAGCAGTG
---GGGAGGACNG
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTGGCAGCAGTG
NTTGGCANN----
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGGCAGCAGTG
TGTTKCCTAGCAACM---
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTGGCAGCAGTG
VGCTGWCAVB----
 A C G T A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCTGGCAGCAGTG
---CGCAGCTGCG
 A T G C A G T C A C G T A C T G A C T G G T A C C T G A A C T G A T G C C G T A A C T G A C G T A C T G
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G