Information for 7-GAGGTGTTCA (Motif 9)

A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A
Reverse Opposite:
C G A T C T A G C T G A C G T A A G T C C G T A A G T C A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif141.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets50.2 +/- 24.6bp
Average Position of motif in Background46.2 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GAGGTGTTCA-
-AGGTGTTAAT
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGTTCA---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTCA
-AGGTGTGA-
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGGTGTTCA-
AAGGTGTGAAA
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTCA
-AGGTGTGA-
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTCA-
-AGGTGTGAAA
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTCA
-AGGTGTCA-
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGGTGTTCA-
TAGGTGTGAAG
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGTTCA
AACAGGTGNT--
 A C G T A C G T A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGGTGTTCA
AAGGTGTGAA
 A T C G G T C A T A C G C T A G A C G T C T A G C G A T A G C T G A T C G C T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A