Information for 10-GCTAGCACAG (Motif 13)

A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G
Reverse Opposite:
G T A C A C G T A C T G A C G T A T C G A G T C A G C T G C T A T C A G A G T C
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.843
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif138.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets42.3 +/- 22.0bp
Average Position of motif in Background52.5 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTAGCACAG
CCAGGAACAG
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCTAGCACAG-
-----CACAGN
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTAGCACAG------
CGAAGCACACAAAATA
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTAGCACAG-
-AAACCACAGC
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTAGCACAG--
NWAACCACADNN
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGCACAG----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTAGCACAG
GGTTGGCAT--
 A C G T A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTAGCACAG
NAAACCACAG
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTAGCACAG--
-AAACCACAGAN
 A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCTAGCACAG-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A A C T G A T G C G T C A A G T C C G T A C A T G A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T