Information for 4-TGCCTGGCCCTGG (Motif 6)

A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G A C T G G T A C A G T C C G T A A C T G A C T G A G T C C G T A
p-value:1e-12
log p-value:-2.817e+01
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 9.3bp
Average Position of motif in Background63.8 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGGCCCTGG
ATGCCCGGGCATGT
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCCTGGCCCTGG
--BNTGDCCTTG-
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCCTGGCCCTGG
---CTGTTCCTGG
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCCTGGCCCTGG
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCCTGGCCCTGG-
----TGACCTTGAN
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCCTGGCCCTGG-
----TGACCTTGAV
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCCTGGCCCTGG----
--GCTGACCTTGAACTN
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCCTGGCCCTGG
---CTGACCTTTG
 A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTGGCCCTGG
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGCCTGGCCCTGG---
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A G T C A G T C A C G T A C T G C T A G A C G T A C G T A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T