Information for 22-GCATCTCACTGTA (Motif 40)

A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A
Reverse Opposite:
A C G T C T G A A G T C C G T A C T A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.757e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 18.1bp
Average Position of motif in Background31.5 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCATCTCACTGTA-----
-AATCGCACTGCATTCCG
 A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCATCTCACTGTA
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCATCTCACTGTA
ATTTGCATAACAAAG--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCATCTCACTGTA---
-NANTTCATTGAATTA
 A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A A C G T A C G T A C G T
A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCATCTCACTGTA
ATTTGCATAACAATG--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCATCTCACTGTA----
TGTTCCCATTGTGTACT
 A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

ZNF410/MA0752.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCATCTCACTGTA---
TCCATCCCATAATACTC
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCATCTCACTGTA---
GCAACCTCATTATNNNN
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCATCTCACTGTA
------CTTTGT-
 A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCATCTCACTGTA
----CTCATTGTC
 A C T G A G T C C G T A A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A G C T C G T A
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C