Information for 2-TGCCTGCYGGGCTGGG (Motif 4)

G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C C G T A A C T G A G T C A G T C G A T C C T A G A T C G A G T C C G T A A C T G C A T G A T G C C G T A
p-value:1e-12
log p-value:-2.961e+01
Information Content per bp:1.791
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.8 +/- 22.3bp
Average Position of motif in Background43.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGCCTGCYGGGCTGGG-
--GGGGCTYGKCTGGGA
 G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCCTGCYGGGCTGGG
GTCATGCHTGRCTGS-
 G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGCCTGCYGGGCTGGG--
--------WDNCTGGGCA
 G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCCTGCYGGGCTGGG
TGCCCTNAGGGCA---
 G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCYGGGCTGGG
TNTCCTGCTGTGNNG--
 A C G T G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCYGGGCTGGG
TCNCCTGCTGNGNNN--
 A C G T G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGCYGGGCTGGG
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCTGCYGGGCTGGG
TGCCCTNAGGGCA---
 G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCYGGGCTGGG
CCCCCTGCTGTG-----
 A C G T G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCCTGCYGGGCTGGG
TGCCCTGAGGGCA---
 G A C T A T C G G A T C A G T C C G A T A C T G T A G C G A C T C T A G A C T G C T A G G T A C A C G T A C T G A C T G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T