Information for 3-CTGVCGCCTGTCCCTC (Motif 3)

A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A T C G C G T A A G T C C T G A A C T G A C T G A T G C C T A G A C G T A T G C C G T A A C T G
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.9 +/- 22.4bp
Average Position of motif in Background64.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTGVCGCCTGTCCCTC-
-----GSCTGTCACTCA
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGVCGCCTGTCCCTC---
----TGCCTGCGYCMCCTT
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTGVCGCCTGTCCCTC-
-------CTGTTCCTGG
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGVCGCCTGTCCCTC--
------NCTGTCAATCAN
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PKNOX2/MA0783.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGVCGCCTGTCCCTC
-TGACACCTGTCA---
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTGVCGCCTGTCCCTC------
------NNAGTCCCACTCNNNN
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CTGVCGCCTGTCCCTC-
-----GCCACRCCCACY
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGVCGCCTGTCCCTC--
------CCCCTCCCCCAC
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGVCGCCTGTCCCTC
-TGACACCTGTCA---
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CTGVCGCCTGTCCCTC
-----GCCCCGCCCC-
 A G T C A C G T A T C G T G A C A G T C A T C G A G T C G T A C G A C T A C T G A C G T A T G C A G T C A G T C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T