Information for 7-SAYATTCATT (Motif 21)

A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G T A C G T A A C G T C T A G A G C T A T C G
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.9 +/- 28.1bp
Average Position of motif in Background42.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:SAYATTCATT------
NNCATTCATTCATNNN
 A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:SAYATTCATT-----
-ACATTCATGACACG
 A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---SAYATTCATT----
GACCACATTCATACAAT
 A C G T A C G T A C G T A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-SAYATTCATT
GHATATKCAT-
 A C G T A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-SAYATTCATT
GAATATTCAT-
 A C G T A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:SAYATTCATT---
---ATTGATTYND
 A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--SAYATTCATT----
AATCAATTCAATAATT
 A C G T A C G T A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:SAYATTCATT
CACATTCCAT
 A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SAYATTCATT--
-ATATTAATTAA
 A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:SAYATTCATT
CACATTCCAT
 A T G C C T G A A G T C C G T A A C G T A C G T A G T C G T C A A C G T A C G T
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T