Information for 8-CCTCTGCKYTGCA (Motif 9)

A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
Reverse Opposite:
A C G T A C T G A T G C C G T A C T A G G T C A C A T G A G T C C G T A C T A G G C T A C A T G A C T G
p-value:1e-12
log p-value:-2.924e+01
Information Content per bp:1.787
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets46.5 +/- 24.2bp
Average Position of motif in Background32.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTGCKYTGCA
NVCAGCTGBBNN---
 A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCKYTGCA
ACCATCTGTT-----
 A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGCKYTGCA
CNGACACCTGTTCNNN-
 A C G T A C G T A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTCTGCKYTGCA------
VCAKCTGGNNNCCAGMTGBN
 A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTGCKYTGCA
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCKYTGCA
CAGCTGNT-----
 A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCKYTGCA
GCCATCTGTT-----
 A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCKYTGCA
AGCAGCTGCT-----
 A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCTGCKYTGCA
CGCAGCTGCG-----
 A C G T A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTGCKYTGCA
HCAGCTGDTN----
 A C G T A G T C G T A C C A G T A G T C A C G T A C T G G A T C A C G T G A T C A C G T A T C G G T A C C G T A
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T