Information for 2-GCTGCCYCCTTGCTGT (Motif 3)

T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T
Reverse Opposite:
C G T A A T G C G T C A A T C G T G A C G C T A C T G A A C T G A C T G C T A G T C A G A C T G A G T C C G T A A C T G A G T C
p-value:1e-19
log p-value:-4.535e+01
Information Content per bp:1.785
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.9 +/- 11.3bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTGCCYCCTTGCTGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCTGCCYCCTTGCTGT-
-----CCCCCTGCTGTG
 T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCCYCCTTGCTGT
CAGCTGTTTCCT------
 A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTGCCYCCTTGCTGT
GCCGCCATCTTG----
 T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTGCCYCCTTGCTGT--
---GGCCYCCTGCTGDGH
 T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTGCCYCCTTGCTGT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTGCCYCCTTGCTGT--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCYCCTTGCTGT--
TAGCGCCCCCTGGTGGCCA
 A C G T T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCTGCCYCCTTGCTGT-
---GACCCCCCGCTGTG
 T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTGCCYCCTTGCTGT
--CGCCCCCTGACA--
 T C A G A G T C A C G T A C T G A G T C A G T C A G T C G T A C A G T C A G C T C G A T A C T G A T G C A C G T A T C G G A C T
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T