Information for 13-GGAGGGCAAATGC (Motif 21)

C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
Reverse Opposite:
T A C G A G T C C G T A A G C T C G A T A G C T A C T G A G T C A T G C A G T C A G C T A G T C A G T C
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.813
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.5 +/- 32.1bp
Average Position of motif in Background46.2 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGGGCAAATGC
NGTGGGCAT----
 C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGAGGGCAAATGC
GTATTGGGTGGGTAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAGGGCAAATGC--
-TAGGGCAAAGGTCA
 C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAGGGCAAATGC
GGGCGGGAAGG---
 A C G T C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAGGGCAAATGC
BTKGGCGGGAAA----
 A C G T A C G T A C G T C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAGGGCAAATGC
CAAAGGTCAAGGG-
 A C G T C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGGGCAAATGC
TNNGGGCAG----
 C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGAGGGCAAATGC-
----GACATATGTT
 C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGAGGGCAAATGC
-----CCATATGT
 C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGGGCAAATGC
CWGGCGGGAA-----
 A C G T A C G T C T A G A C T G C T G A A C T G A T C G A C T G G T A C C T G A C G T A C T G A C G A T A C T G A T G C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T