Information for 1-CTCCGCGGCTGCG (Motif 2)

A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G A T G C A G T C A T C G G T A C A C T G A T C G C T G A A T C G
p-value:1e-13
log p-value:-3.029e+01
Information Content per bp:1.887
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.7 +/- 22.4bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTCCGCGGCTGCG
---CGCAGCTGCG
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTCCGCGGCTGCG--
----GCGCCTGCGCA
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCCGCGGCTGCG----
CTCAGCAGCTGCTACTG
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCCGCGGCTGCG-
--CTGCGCATGCGC
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G A C G T
A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCGCGGCTGCG
--CAGCAGCTGN-
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCCGCGGCTGCG-
--GTGCGCATGCGC
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G A C G T
A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCCGCGGCTGCG
NNGCNCTGCGCGGC----
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCCGCGGCTGCG
--NNGCAGCTGTC
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCCGCGGCTGCG-
----GCAGCTGTNN
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCCGCGGCTGCG
-NNAGCAGCTGCT
 A T G C A G C T A T G C G T A C A C T G A T G C A C T G A T C G A G T C A C G T A C T G A G T C C T A G
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T