Information for 3-TGGCTKTGCAGGGTTT (Motif 5)

C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
Reverse Opposite:
G T C A G T C A T C G A G T A C A G T C A G T C A C G T A C T G A G T C G C T A G T A C C G T A A C T G G T A C A T G C G C T A
p-value:1e-13
log p-value:-3.066e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 23.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCTKTGCAGGGTTT
GGGGCTYGKCTGGGA--
 A C G T C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGCTKTGCAGGGTTT
WDNCTGGGCA------
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGGCTKTGCAGGGTTT
--DCTCAGCAGG----
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGCTKTGCAGGGTTT
---CTGTTCCTGG---
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGGCTKTGCAGGGTTT
---CACAGCAGGGGG-
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGCTKTGCAGGGTTT
--GCTGTG--------
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGGCTKTGCAGGGTTT-
--DCHCAGCAGGRGGCC
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TGGCTKTGCAGGGTTT
TWGTCTGV---------
 A C G T C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGGCTKTGCAGGGTTT-
---CTTCGCGGGGGGTC
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGGCTKTGCAGGGTTT
-NGCTN----------
 C G A T A T C G A C T G A G T C C G A T A C T G C G A T A C T G A G T C G T C A C T A G C T A G A C T G A G C T A C G T A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T