Information for 10-AATCCAGCCT (Motif 30)

C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.941
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.8 +/- 26.5bp
Average Position of motif in Background57.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AATCCAGCCT-
NNTAATCCNGNCNN
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AATCCAGCCT
TAATCCCN---
 A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATCCAGCCT
TTAATCCC----
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGCCT
CTTAATCCC----
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGCCT
GCTAATCC-----
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AATCCAGCCT-
---BCAGACWA
 C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATCCAGCCT
ATAATCCC----
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGCCT---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGCCT
NYTAATCCYB---
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATCCAGCCT
ATGCCAGACN
 C G T A C G T A A C G T A G T C A G T C C G T A C T A G A G T C A G T C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C