Information for 13-WTCMGMACCTTSG (Motif 21)

C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
Reverse Opposite:
A G T C A T G C C G T A C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A C G T A
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 26.3bp
Average Position of motif in Background39.6 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:WTCMGMACCTTSG--------
TTCAGCACCATGGACAGCGCC
 C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:WTCMGMACCTTSG--------
-TCAGCACCATGGACAGCTCC
 C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-WTCMGMACCTTSG---
NNTNCGCACCTGTNGAN
 A C G T C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WTCMGMACCTTSG
NGTCAGCANTTT--
 A C G T C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----WTCMGMACCTTSG
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----WTCMGMACCTTSG
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:WTCMGMACCTTSG
ATTAACACCT---
 C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---WTCMGMACCTTSG
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WTCMGMACCTTSG
GTCAGCANNTN--
 C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WTCMGMACCTTSG
---CGCACCTGCT
 C G A T A C G T A G T C G T C A A C T G G T A C C G T A A G T C A G T C C G A T C G A T A T C G A C T G
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T