Information for 12-NSAGAGAAGTAVN (Motif 20)

A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
Reverse Opposite:
A C G T A T G C A G C T T C G A T A G C A C G T A C G T A T G C G C A T T A G C C A G T A T G C T G C A
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.372
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 26.4bp
Average Position of motif in Background59.0 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:NSAGAGAAGTAVN
----NGAAGC---
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:NSAGAGAAGTAVN
ANAGATAAGAA--
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:NSAGAGAAGTAVN
-CAGATAAGGN--
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:NSAGAGAAGTAVN
-NAGATAAGNN--
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-NSAGAGAAGTAVN
NNGAGATAAGA---
 A C G T A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:NSAGAGAAGTAVN
NVAGATAAGR---
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:NSAGAGAAGTAVN
--AGATAAGA---
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:NSAGAGAAGTAVN-
NCAGATAAGAANNN
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:NSAGAGAAGTAVN
-AAGGCAAGTGT-
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:NSAGAGAAGTAVN
---NTCAAGTGG-
 A C G T T A C G G T C A A T C G C G T A T A C G T G C A T G C A A T C G A C G T T C G A T A C G T G C A
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T