Information for 6-CCCGTCTTGACGG (Motif 12)

T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
Reverse Opposite:
T A G C G A T C C T A G C A G T A T G C C G T A C T G A A C T G C G T A A G T C A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.678
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif115.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.6 +/- 23.2bp
Average Position of motif in Background55.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCCGTCTTGACGG
--CGTCTAGACA-
 T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCGTCTTGACGG
VBSYGTCTGG----
 A C G T T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCGTCTTGACGG
-CTGTCTGG----
 T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTCTTGACGG
GCNGCCATCTTG----
 A C G T A C G T A C G T T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTCTTGACGG
GCCGCCATCTTG----
 A C G T A C G T A C G T T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTCTTGACGG-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCCGTCTTGACGG-
------TTGACAGC
 T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTCTTGACGG
TAAGGCGTCTTG----
 A C G T A C G T A C G T T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCGTCTTGACGG
NAACATCTGGATN-
 A C G T T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCCGTCTTGACGG------
---GTATTGACAGGTNNTT
 T A G C T G A C G T A C T C A G G A C T A G T C G A C T G C A T A T C G G T C A G A T C C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T