Information for 4-GCAGRATGTTCTG (Motif 6)

C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
Reverse Opposite:
A T G C G T C A A T C G C G T A C T G A A G T C C G T A A C G T A G C T A T G C A G C T A T C G A G T C
p-value:1e-12
log p-value:-2.793e+01
Information Content per bp:1.832
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.1 +/- 22.1bp
Average Position of motif in Background41.2 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCAGRATGTTCTG
GRACAGWMTGTYCTB
 A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCAGRATGTTCTG
GVACAGNMTGTYCTB
 A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCAGRATGTTCTG
GAACADWATGTTCTT
 A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCAGRATGTTCTG
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCAGRATGTTCTG
AGNACANNNTGTNCTN
 A C G T A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAGRATGTTCTG
NTGGAATGTN---
 C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCAGRATGTTCTG
ANCAGGATGT----
 A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCAGRATGTTCTG
NTGGAATGTG---
 C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAGRATGTTCTG
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAGRATGTTCTG
GGGTACATAATGTTCCC
 A C G T A C G T A C G T A C G T C T A G A T G C C T G A A T C G C T G A C G T A A C G T A C T G A G C T C G A T A T G C A C G T A T C G
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C