Information for 13-KGCATGASCYCAC (Motif 12)

A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C T G A A C T G A T C G A C G T A G T C C G T A A G C T A T C G A G T C G T A C
p-value:1e-7
log p-value:-1.803e+01
Information Content per bp:1.886
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.2 +/- 24.3bp
Average Position of motif in Background47.4 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-KGCATGASCYCAC---
TGTCGTGACCCCTTAAT
 A C G T A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:KGCATGASCYCAC--
---ATGACGTCAYYN
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:KGCATGASCYCAC--
---ATGACGTCATCN
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:KGCATGASCYCAC--
---RTGACGTCAYCN
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KGCATGASCYCAC---
NNCNTGACCCCGCTCT
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:KGCATGASCYCAC
----TGACCTYA-
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:KGCATGASCYCAC-
--GATGACGTCATC
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T
A C G T A C G T T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KGCATGASCYCAC----
--NATGACATCATCNNN
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:KGCATGASCYCAC--
---ATGACGTCATCN
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:KGCATGASCYCAC
----TGACCYCT-
 A C T G C T A G A T G C C T G A A C G T A C T G C G T A T A C G A G T C A G C T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T